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Creators/Authors contains: "Cuendet, Michel"

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Online Boosted Gaussian Learners for In-Situ Detection and Characterization of Protein Folding States in Molecular Dynamics Simulations

https://doi.org/10.1109/e-Science58273.2023.10254895

Sahni, Harshita; Carrillo-Cabada, Hector; Kots, Ekaterina; Caino-Lores, Silvina; Marquez, Jack; Deelman, Ewa; Cuendet, Michel; Weinstein, Harel; Taufer, Michela; Estrada, Trilce (October 2023, Proceedings of the 19th IEEE International Conference on e-Science (eScience))

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Runtime Steering of Molecular Dynamics Simulations Through In Situ Analysis and Annotation of Collective Variables

https://doi.org/10.1145/3592979.3593420

Caino-Lores, Silvina; Cuendet, Michel; Marquez, Jack; Kots, Ekaterina; Estrada, Trilce; Deelman, Ewa; Weinstein, Harel; Taufer, Michela (June 2023, ACM)

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A lightweight method for evaluating in situ workflow efficiency

https://doi.org/10.1016/j.jocs.2020.101259

Do, Tu Mai; Pottier, Loïc; Caíno-Lores, Silvina; Ferreira da Silva, Rafael; Cuendet, Michel A.; Weinstein, Harel; Estrada, Trilce; Taufer, Michela; Deelman, Ewa (January 2021, Journal of Computational Science)
null (Ed.)
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A Graphic Encoding Method for Quantitative Classification of Protein Structure and Representation of Conformational Changes

https://doi.org/10.1109/TCBB.2019.2945291

Carrillo-Cabada, Hector; Benson, Jeremy; Razavi, Asghar; Mulligan, Brianna; Cuendet, Michel A.; Weinstein, Harel; Taufer, Michela; Estrada, Trilce (October 2019, IEEE/ACM Transactions on Computational Biology and Bioinformatics)

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Characterizing In Situ and In Transit Analytics of Molecular Dynamics Simulations for Next-Generation Supercomputers

https://doi.org/10.1109/eScience.2019.00027

Taufer, Michela; Thomas, Stephen; Wyatt, Michael; Anh Do, Tu Mai; Pottier, Loic; da Silva, Rafael Ferreira; Weinstein, Harel; Cuendet, Michel A.; Estrada, Trilce; Deelman, Ewa (September 2019, 2019 15th International Conference on eScience (eScience))

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Graphic Encoding of Macromolecules for Efficient High-Throughput Analysis

https://doi.org/10.1145/3233547.3233607

Estrada, Trilce; Benson, Jeremy; Carrillo-Cabada, Hector; Razavi, Asghar M.; Cuendet, Michel A.; Weinstein, Harel; Deelman, Ewa; Taufer, Michela (January 2018, BCB '18 Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics)

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